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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33827260_33827783_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33827260 - 33827783

Intron Length:

524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGAGTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

ATTCCTTTAAAA

Flanking Amino Acid:

IQACCALTGEGLCQGLEWMM

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.8

0.8

78.9

35.3

Major BPS

73.1

0.58

79.6

29.1

Major PPT

88.8

0.87

0.8

83.2

31.9

Minor 5ss

35.9

-1.6

3.6

48.1

47.5

Minor BPS

70.6

0.64

1.3

76.83

33.2

Associated Gene:

Gene:

ARL5A

Ensembl Gene ID:

ENSAPLG00000022181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033961

33825670 - 33836426

10757