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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33827936_33831402_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33827936 - 33831402

Intron Length:

3467

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCTCCCAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

TTGTAATTACGT

Flanking Amino Acid:

EELYKMLAHEDLKKAGLLIF

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.8

38.7

Major BPS

84.4

0.85

1.1

34.5

Major PPT

69.4

0.44

67.9

32.6

Minor 5ss

29.7

-2.3

2.6

33.4

41.8

Minor BPS

45.8

-0.2

2.3

69.87

46.6

Associated Gene:

Gene:

ARL5A

Ensembl Gene ID:

ENSAPLG00000022181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033961

33825670 - 33836426

10757