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Intron Name: Anas_platyrhynchos_platyrhynchos_7_3382839_3384224_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3382839 - 3384224

Intron Length:

1386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCTTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTCAATGGAACT

Flanking Amino Acid:

NMGSCTFGPLGNGLQTGPES

Intron Amino Acid Position:

230

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

82.7

0.73

0.7

Minor 5ss

38.3

-1.3

45.5

42.6

Minor BPS

-0.3

2.2

66.31

44.2

Associated Gene:

Gene:

NABP1

Ensembl Gene ID:

ENSAPLG00000024306

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034526

3381335 - 3389344

8010