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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33832575_33835560_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33832575 - 33835560

Intron Length:

2986

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATT|GTAAGTATG

5'SS Class:

major

3'SS Sequence:

GTTCTCCCTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

TGTCTCAGAGTT

Flanking Amino Acid:

NAGKTTILYQFSMNEVVHTS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

76.5

38.6

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

80.6

0.69

0.8

31.1

Minor 5ss

41.9

-0.9

2.8

57.5

Minor BPS

44.3

-0.3

1.8

64.16

39.9

Associated Gene:

Gene:

ARL5A

Ensembl Gene ID:

ENSAPLG00000022181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033961

33825670 - 33836426

10757