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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33835622_33836380_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33835622 - 33836380

Intron Length:

759

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCGCG

5'SS Class:

major

3'SS Sequence:

ATTTTTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TGTGACTTACCT

Flanking Amino Acid:

TRIWRLFNHQEHKVIIVGLD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

56.7

42.7

Major BPS

72.5

0.56

1.2

39.9

Major PPT

87.1

0.83

0.8

85.1

34.9

Minor 5ss

30.8

-2.2

3.2

30.6

42.7

Minor BPS

56.9

0.29

1.9

77.67

44.4

Associated Gene:

Gene:

ARL5A

Ensembl Gene ID:

ENSAPLG00000022181

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033961

33825670 - 33836426

10757