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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33871895_33872244_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33871895 - 33872244

Intron Length:

350

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCACTCT

5'SS Class:

major

3'SS Sequence:

TTTCTGTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TGTTTGTGATGT

Flanking Amino Acid:

QAAIQLERAKSKPVAFAVKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.1

0.4

1.1

61.9

39.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.9

0.79

0.7

80.8

31.2

Minor 5ss

39.3

-1.2

3.3

56.7

47.5

Minor BPS

41.6

-0.5

2.4

64.8

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027557

33862477 - 33888445

25969

ENSAPLT00000009790

33847199 - 33910984

63786

ENSAPLT00000037274

33847199 - 33911417

64219

ENSAPLT00000036189

33846735 - 33888445

41711