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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33872365_33888400_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33872365 - 33888400

Intron Length:

16036

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGGGTGCC

5'SS Class:

major

3'SS Sequence:

TTTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAC

U12 Branch Point Sequence:

GTTTTCTTAGCG

Flanking Amino Acid:

YLHGFEDSEAGSADSYTSRP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

62.1

38.4

Major BPS

81.5

0.78

0.9

71.6

36.1

Major PPT

97.2

1.06

0.5

96.4

12.2

Minor 5ss

27.6

-2.6

3.3

35.7

41.2

Minor BPS

67.5

0.41

1.6

71.89

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009361

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036189

33846735 - 33888445

41711

ENSAPLT00000027557

33862477 - 33888445

25969