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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33910872_33910975_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
33910872 - 33910975

Intron Length:
104

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTGGGTGCT

5'SS Class:
major

3'SS Sequence:
TTCCCCGGCGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCTGAT

U12 Branch Point Sequence:
CGACCCTGATGT

Flanking Amino Acid:
MAAVTRGTATRRS

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1.1
66.2
39.6

Major BPS
66.4
0.41
1.1
56.9
40.5

Major PPT
65.9
0.36
1
60.7
35.1

Minor 5ss
29
-2.4
3.4
41.3
45.2

Minor BPS
43.5
-0.4
2
56.15
45.4

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

33847199 - 33910984
63786