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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33917508_33919046_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33917508 - 33919046

Intron Length:

1539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTACC

5'SS Class:

strong_major

3'SS Sequence:

TTTTAATTAACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

PPTSSGVSVQSYPVQPPSGN

Intron Amino Acid Position:

393

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.7

0.75

1.2

78.8

35.5

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

0.65

74.4

38.9

Minor 5ss

32.4

-2

2.5

38.4

39.2

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010179

33916346 - 33935367

19022

ENSAPLT00000010175

33913389 - 33935367

21979