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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33919201_33919833_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33919201 - 33919833

Intron Length:

633

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGTTTTGAAAC

Flanking Amino Acid:

MIDEKLEEIDRKHSELSELN

Intron Amino Acid Position:

341

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.8

38.4

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.1

0.45

1.1

66.4

43.3

Minor 5ss

28.1

-2.5

2.7

31.4

42.8

Minor BPS

51.9

0.04

1.5

60.75

38.3

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010179

33916346 - 33935367

19022

ENSAPLT00000010175

33913389 - 33935367

21979