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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33920472_33920651_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33920472 - 33920651

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCCCACCTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTAATCTTATCT

Flanking Amino Acid:

AEPEPVYIDEDKMDKTLQVL

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

74.4

41.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

76.9

0.61

0.8

72.9

31.6

Minor 5ss

47.2

-0.3

2.6

66.5

44.6

Minor BPS

65.3

0.56

1.6

81.38

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010175

33913389 - 33935367

21979

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010179

33916346 - 33935367

19022