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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33921245_33922454_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33921245 - 33922454

Intron Length:

1210

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACGC

5'SS Class:

major

3'SS Sequence:

TTTATTTCCCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

GGTTTTGTAACA

Flanking Amino Acid:

SGEIIFVLDDSDANWWKGEN

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.6

0.49

1.1

55.8

41.7

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.2

0.77

0.8

77.3

36.8

Minor 5ss

37.8

-1.4

3.1

51.2

45.4

Minor BPS

54.7

0.14

68.06

38.5

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010179

33916346 - 33935367

19022

ENSAPLT00000010175

33913389 - 33935367

21979