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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33923059_33924677_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33923059 - 33924677

Intron Length:

1619

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAGCT

5'SS Class:

strong_major

3'SS Sequence:

AACACATTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTTAT

U12 Branch Point Sequence:

CTATTGTTAACA

Flanking Amino Acid:

GVTFPAAGSQATTNAAKNGS

Intron Amino Acid Position:

149

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

74.9

33.2

Major BPS

74.8

0.62

0.9

63.7

35.1

Major PPT

67.3

0.39

58.8

Minor 5ss

32.4

-2

3.5

48.3

47.4

Minor BPS

59.6

0.3

2.1

71.36

41.1

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010179

33916346 - 33935367

19022

ENSAPLT00000010175

33913389 - 33935367

21979