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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33924825_33927217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33924825 - 33927217

Intron Length:

2393

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TTCTATGCAATT

Flanking Amino Acid:

VPHVALQALTAHPKVSEKLK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

0.85

0.9

39.9

Major PPT

0.79

0.7

77.9

36.6

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

45.3

-0.2

2.2

68.49

43.1

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010179

33916346 - 33935367

19022