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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33927011_33927217_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33927011 - 33927217

Intron Length:

207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAAA

5'SS Class:

major

3'SS Sequence:

TTTCTGTTGTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAT

U12 Branch Point Sequence:

TACATCTTCACC

Flanking Amino Acid:

VPHVALQALTLLGACVSNCG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

73.4

32.4

Major BPS

84.8

0.86

1.1

85.7

34.9

Major PPT

80.2

0.68

80.5

Minor 5ss

31.8

-2.1

2.7

38.8

40.3

Minor BPS

53.7

0.1

1.8

63.61

41.9

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039298

33915845 - 33935367

19523

ENSAPLT00000010175

33913389 - 33935367

21979