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Intron Name: Anas_platyrhynchos_platyrhynchos_7_33927294_33928638_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

33927294 - 33928638

Intron Length:

1345

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

GTTCCTTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

CTATCGCTAATA

Flanking Amino Acid:

ICDKVGSTPNGAKDCLKAIM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

74.9

38.1

Major BPS

0.42

1.2

67.3

37.8

Major PPT

82.6

0.73

0.7

Minor 5ss

45.1

-0.5

2.9

56.2

Minor BPS

48.2

-0.1

2.3

64.64

42.1

Associated Gene:

Gene:

STAM2

Ensembl Gene ID:

ENSAPLG00000009755

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010179

33916346 - 33935367

19022

ENSAPLT00000010175

33913389 - 33935367

21979

ENSAPLT00000039298

33915845 - 33935367

19523