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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34056605_34058005_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34056605 - 34058005

Intron Length:

1401

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATAAAT

U12 Branch Point Sequence:

TCACCATTAGCC

Flanking Amino Acid:

PTKKRPGKDSGNWDTSGSEL

Intron Amino Acid Position:

844

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.2

0.5

1.1

72.1

40.1

Major BPS

65.7

0.39

71.3

30.3

Major PPT

89.7

0.89

0.6

85.1

22.4

Minor 5ss

59.5

0.32

2.7

83.5

34.9

Minor BPS

49.9

-0

1.9

62.36

42.4

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000048511

34056448 - 34076566

20119