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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34058141_34059428_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34058141 - 34059428

Intron Length:

1288

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCT|GTAAGTGCA

5'SS Class:

major

3'SS Sequence:

TTTGTTTACAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TAATATTTAATA

Flanking Amino Acid:

KKSKKRRHKSDSPESDIERD

Intron Amino Acid Position:

799

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.1

68.4

36.6

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

69.1

0.43

1.1

71.2

37.9

Minor 5ss

35.9

-1.6

3.2

51.5

44.9

Minor BPS

65.2

0.47

1.4

70.48

35.4

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729