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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34059854_34060554_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34059854 - 34060554

Intron Length:

701

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATTACT

5'SS Class:

strong_major

3'SS Sequence:

TCATGTACTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATGTACT

Flanking Amino Acid:

IFKDFMHVLEHECQHHHSKN

Intron Amino Acid Position:

856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.8

0.89

0.9

86.4

28.9

Major BPS

100

1.24

0.5

100

Major PPT

68.3

0.41

0.9

59.5

41.5

Minor 5ss

38.4

-1.3

2.7

52.9

43.7

Minor BPS

59.4

0.38

2.1

86.73

38.4

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000011132

34056512 - 34076566

20055