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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34061514_34061684_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34061514 - 34061684

Intron Length:

171

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGACAG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTTTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TACTTAC

U12 Branch Point Sequence:

AATTCCTTACTT

Flanking Amino Acid:

EKKIIKDILKDKGFVVEVNT

Intron Amino Acid Position:

739

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

67.7

39.3

Major BPS

73.7

0.59

0.9

63.6

35.1

Major PPT

92.8

0.96

0.7

88.1

28.6

Minor 5ss

25.9

-2.8

2.9

29.3

43.4

Minor BPS

71.6

0.76

1.5

83.61

37.4

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000011132

34056512 - 34076566

20055