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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34061777_34061934_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34061777 - 34061934

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAATT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCATCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTTGACTTATTT

Flanking Amino Acid:

IRFTNMLGQPGSTALDLFKF

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.8

86.3

28.9

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

82.4

0.73

0.9

82.4

Minor 5ss

39.6

-1.2

3.2

55.5

42.8

Minor BPS

59.1

0.36

1.9

80.67

41.5

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000011132

34056512 - 34076566

20055

ENSAPLT00000048511

34056448 - 34076566

20119