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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34062050_34062329_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34062050 - 34062329

Intron Length:

280

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTGGTGGA

5'SS Class:

major

3'SS Sequence:

TTGTATTTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCAAT

U12 Branch Point Sequence:

TTGTATTTTACA

Flanking Amino Acid:

RQRKNRESFQIFLDELHEHG

Intron Amino Acid Position:

670

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.5

0.53

1.2

64.5

41.8

Major BPS

71.8

0.54

1.2

32.5

Major PPT

85.7

0.8

80.1

37.1

Minor 5ss

-2.6

3.1

32.5

42.2

Minor BPS

58.1

0.25

1.8

71.98

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011132

34056512 - 34076566

20055

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729