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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34062464_34063284_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34062464 - 34063284

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTATGTAAA

5'SS Class:

major

3'SS Sequence:

TACCTGTTCCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTACTCTTAATG

Flanking Amino Acid:

PTFAEDEELQNMDKEDALIC

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.1

69.6

36.5

Major BPS

0.92

0.9

86.2

29.1

Major PPT

69.2

0.43

0.9

61.2

39.8

Minor 5ss

42.4

-0.8

2.5

46.9

42.8

Minor BPS

69.9

0.49

1.3

69.41

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011132

34056512 - 34076566

20055

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729