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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34066125_34066650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34066125 - 34066650

Intron Length:

526

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTTCAG

5'SS Class:

major

3'SS Sequence:

CATGTCTTGACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

CATGTCTTGACA

Flanking Amino Acid:

QAFKELLKEKRVPSNASWEQ

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.2

0.6

1.1

63.4

42.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

69.6

0.44

64.6

41.1

Minor 5ss

39.7

-1.2

2.8

49.6

46.6

Minor BPS

62.1

0.38

1.4

66.29

40.5

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000011132

34056512 - 34076566

20055

ENSAPLT00000048511

34056448 - 34076566

20119