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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34067445_34067924_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34067445 - 34067924

Intron Length:

480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGATACCTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTTCTGATACCT

Flanking Amino Acid:

LEAMIKAEENSTKPEESTAA

Intron Amino Acid Position:

325

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

88.1

28.7

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

70.4

0.46

62.2

38.9

Minor 5ss

45.1

-0.5

3.1

44.3

Minor BPS

-0.3

2.4

73.75

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000048044

34056448 - 34073176

16729

ENSAPLT00000011132

34056512 - 34076566

20055