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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34072053_34074849_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34072053 - 34074849

Intron Length:

2797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGCAT

5'SS Class:

major

3'SS Sequence:

TGTTTAATTATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATATCAT

U12 Branch Point Sequence:

TACTGTTTAATT

Flanking Amino Acid:

PPMGGPPMGQMPGMMQSVMP

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.2

69.6

42.7

Major BPS

79.4

0.73

80.1

Major PPT

76.8

0.6

0.9

70.8

38.9

Minor 5ss

-1.4

3.4

55.8

48.4

Minor BPS

62.9

0.48

1.7

76.34

41.1

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000011132

34056512 - 34076566

20055