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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34074988_34076200_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34074988 - 34076200

Intron Length:

1213

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGCG

5'SS Class:

strong_major

3'SS Sequence:

TGCTGCCTTTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

ATTTCCTTCATT

Flanking Amino Acid:

PGAVDRGSLMMGHPGMPHYP

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

0.9

67.6

37.6

Major BPS

0.87

0.8

85.6

Major PPT

77.5

0.62

0.9

73.3

37.2

Minor 5ss

27.7

-2.6

29.4

36.9

Minor BPS

75.1

0.87

1.7

90.25

33.9

Associated Gene:

Gene:

PRPF40A

Ensembl Gene ID:

ENSAPLG00000010600

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048511

34056448 - 34076566

20119

ENSAPLT00000011132

34056512 - 34076566

20055