Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34180610_34184431_F

Intron Information:

Intron Rank:

138717

Intron Class:

major

Intron Phase:

Intron Coordinates:

34180610 - 34184431

Intron Length:

3822

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATCTGCT

5'SS Class:

major

3'SS Sequence:

CTCGTAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AATCTCGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.59

1.2

71.5

38.6

Major BPS

84.4

0.85

1.1

34.5

Major PPT

70.2

0.45

0.9

66.9

38.3

Minor 5ss

-0.3

2.9

68.1

42.9

Minor BPS

53.2

0.18

72.6

38.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024704

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023530

34176954 - 34185038

8085