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Intron Name: Anas_platyrhynchos_platyrhynchos_7_342173_350504_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

342173 - 350504

Intron Length:

8332

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTAAAT

U12 Branch Point Sequence:

ATGGATTAAATT

Flanking Amino Acid:

IKAAFAELHSCIIDKEVSLM

Intron Amino Acid Position:

212

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

73.5

0.58

79.3

29.4

Major PPT

93.2

0.97

0.6

92.1

18.5

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

46.5

-0.1

1.9

62.36

42.6

Associated Gene:

Gene:

SPATS2L

Ensembl Gene ID:

ENSAPLG00000008552

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008896

334741 - 359689

24949