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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34270137_34271055_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34270137 - 34271055

Intron Length:

919

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGTGG

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAA

U12 Branch Point Sequence:

TTTTTCTTACAG

Flanking Amino Acid:

EPLLARIKEDRKTVVCPIID

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

66.5

41.6

Major BPS

90.4

0.7

90.2

19.3

Major PPT

96.2

1.04

0.5

91.9

19.1

Minor 5ss

30.7

-2.2

3.2

37.8

47.1

Minor BPS

63.2

0.28

1.8

72.05

40.8

Associated Gene:

Gene:

GALNT13

Ensembl Gene ID:

ENSAPLG00000011024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011496

34220081 - 34293536

73456

ENSAPLT00000045805

34220081 - 34322129

102049

ENSAPLT00000044796

34221504 - 34322129

100626

ENSAPLT00000032251

34213847 - 34286928

73082

ENSAPLT00000017350

34213847 - 34322129

108283