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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34279116_34286756_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34279116 - 34286756

Intron Length:

7641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAATTGCC

5'SS Class:

major

3'SS Sequence:

GTTTTGATTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TTTTAGTCAACG

Flanking Amino Acid:

GGENLEMSFRIWQCGGSLEI

Intron Amino Acid Position:

326

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

66.3

40.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

81.4

0.71

0.9

78.1

40.1

Minor 5ss

33.6

-1.9

3.1

36.8

40.3

Minor BPS

49.4

-0.1

2.4

68.84

44.2

Associated Gene:

Gene:

GALNT13

Ensembl Gene ID:

ENSAPLG00000011024

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017350

34213847 - 34322129

108283

ENSAPLT00000011496

34220081 - 34293536

73456

ENSAPLT00000045805

34220081 - 34322129

102049

ENSAPLT00000044796

34221504 - 34322129

100626