Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34362820_34364081_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34362820 - 34364081

Intron Length:

1262

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTACGTGTT

5'SS Class:

major

3'SS Sequence:

TAACTCCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAC

U12 Branch Point Sequence:

TCCTCTTTACCT

Flanking Amino Acid:

GPAWTFHIPSQSVPSHSYSS

Intron Amino Acid Position:

335

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.1

70.4

40.2

Major BPS

81.9

0.79

0.8

81.9

Major PPT

69.6

0.44

0.9

63.4

33.6

Minor 5ss

39.7

-1.1

3.6

42.7

Minor BPS

66.8

0.61

1.6

78.9

Associated Gene:

Gene:

KCNJ3

Ensembl Gene ID:

ENSAPLG00000011864

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012344

34346270 - 34364375

18106