Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34382760_34383900_R

Intron Information:

Intron Rank:

133353

Intron Class:

major

Intron Phase:

Intron Coordinates:

34382760 - 34383900

Intron Length:

1141

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGTCTT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTCTCTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCCTAC

U12 Branch Point Sequence:

TTTTTCCTACCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

38.1

Major BPS

58.9

0.22

1.3

58.4

Major PPT

82.2

0.73

0.7

81.5

30.6

Minor 5ss

39.1

-1.2

3.3

58.7

45.8

Minor BPS

63.8

0.51

1.9

88.18

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018985

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024085

34382236 - 34384173

1938