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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34659431_34660514_F

Intron Information:

Intron Rank:
1
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
34659431 - 34660514
Intron Length:
1084

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAT|GTGGGTCTC
5'SS Class:
major
3'SS Sequence:
ACCTCCTTTTTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTTCAC
U12 Branch Point Sequence:
ATATTTTCACCT
Flanking Amino Acid:
PENGEQPAADDYAKERYGVS
Intron Amino Acid Position:
27

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
69.6
0.46
1.1
65.2
40.8
Major BPS
90.1
0.99
0.7
91.6
20.3
Major PPT
75.9
0.58
0.8
73.3
30.9
Minor 5ss
34.4
-1.8
3.4
48.1
41.3
Minor BPS
50.4
0.09
1.8
70.82
40.4

Associated Gene:

Gene:
DARS1
Ensembl Gene ID:
ENSAPLG00000001845
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002244
34659353 - 34698552
39200