Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_3467311_3467629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3467311 - 3467629

Intron Length:

319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATTGCTG

5'SS Class:

major

3'SS Sequence:

ATATTTTTTAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTATTAATA

Flanking Amino Acid:

LVTRINESIKAQTKVRKKVM

Intron Amino Acid Position:

374

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.1

58.9

45.4

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

74.4

0.55

1.1

75.2

38.1

Minor 5ss

40.5

-1.1

3.3

55.9

48.3

Minor BPS

68.4

0.58

1.5

77.1

33.4

Associated Gene:

Gene:

MYO1B

Ensembl Gene ID:

ENSAPLG00000012334

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033988

3429804 - 3509635

79832

ENSAPLT00000025498

3429804 - 3509635

79832

ENSAPLT00000024058

3429804 - 3509635

79832

ENSAPLT00000012947

3429804 - 3509635

79832