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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34692291_34693287_F

Intron Information:

Intron Rank:
10
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
34692291 - 34693287
Intron Length:
997

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
GAG|GTAATGAGA
5'SS Class:
major
3'SS Sequence:
TTCTTCTGTGTAG|A
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTTGTAT
U12 Branch Point Sequence:
TTTGTGTCTATT
Flanking Amino Acid:
MVQIFKGLQERFQTEIQTVN
Intron Amino Acid Position:
324

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.7
0.7
1
71.5
39.9
Major BPS
71.5
0.53
1.4
71.7
44.6
Major PPT
79.9
0.67
0.8
77
31.7
Minor 5ss
31.7
-2.1
3.1
40.5
45.2
Minor BPS
42.1
-0.5
2.4
67.04
44.2

Associated Gene:

Gene:
DARS1
Ensembl Gene ID:
ENSAPLG00000001845
Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000002244
34659353 - 34698552
39200