Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34713283_34714264_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34713283 - 34714264

Intron Length:

982

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATACTG

5'SS Class:

major

3'SS Sequence:

TTATGTCACAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAC

U12 Branch Point Sequence:

ACTGTCTTACTA

Flanking Amino Acid:

LLFARQFKPKISKESEDFIV

Intron Amino Acid Position:

592

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.6

0.7

68.3

42.6

Major BPS

89.7

0.98

0.7

89.9

Major PPT

59.8

0.22

1.1

60.4

39.7

Minor 5ss

35.6

-1.6

3.2

47.5

Minor BPS

51.5

0.04

1.7

60.27

40.8

Associated Gene:

Gene:

MCM6

Ensembl Gene ID:

ENSAPLG00000016365

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032029

34704658 - 34716909

12252

ENSAPLT00000017090

34704658 - 34717341

12684