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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34740355_34742067_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

34740355 - 34742067

Intron Length:

1713

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

ACG|GCTGGAAGA

5'SS Class:

weak_major

3'SS Sequence:

CCTAGGCAAACAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCAAACTTCACT

Flanking Amino Acid:

RSLTSSPPKHVRKRVMEKRG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.4

52.5

Major BPS

72.5

0.56

1.2

39.9

Major PPT

54.2

0.09

1.1

46.9

39.5

Minor 5ss

-3.7

3.5

24.2

36.7

Minor BPS

50.7

0.1

70.66

45.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030618

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031854

34740224 - 34742107

1884