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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34768632_34769181_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34768632 - 34769181

Intron Length:

550

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCAATTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAA

U12 Branch Point Sequence:

GTGTTCTCAATT

Flanking Amino Acid:

VPYPSVPSYQVSVPQGSQAV

Intron Amino Acid Position:

723

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.6

0.82

0.9

83.1

30.9

Major BPS

85.7

0.89

0.8

85.9

22.5

Major PPT

77.2

0.61

0.8

33.5

Minor 5ss

30.6

-2.2

41.1

45.5

Minor BPS

64.1

0.52

1.5

76.5

40.5

Associated Gene:

Gene:

R3HDM1

Ensembl Gene ID:

ENSAPLG00000015231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033801

34758868 - 34808395

49528

ENSAPLT00000043654

34758868 - 34808395

49528

ENSAPLT00000032893

34758868 - 34808395

49528

ENSAPLT00000041977

34758868 - 34808395

49528

ENSAPLT00000031200

34758868 - 34808395

49528

ENSAPLT00000035405

34758868 - 34808395

49528

ENSAPLT00000015922

34758868 - 34808395

49528

ENSAPLT00000033977

34758868 - 34807312

48445

ENSAPLT00000046710

34758868 - 34808395

49528