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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34774507_34778610_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34774507 - 34778610

Intron Length:

4104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCACATG

5'SS Class:

major

3'SS Sequence:

TTAACAACTACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

TTTTTTTTAACA

Flanking Amino Acid:

QPAANHILSQQDNLGSQFSH

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

62.3

43.9

Major BPS

87.3

0.93

0.8

36.5

Major PPT

0.41

59.7

40.4

Minor 5ss

35.8

-1.6

3.3

47.9

47.8

Minor BPS

86.3

1.14

0.8

90.59

23.6

Associated Gene:

Gene:

R3HDM1

Ensembl Gene ID:

ENSAPLG00000015231

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033977

34758868 - 34807312

48445

ENSAPLT00000015922

34758868 - 34808395

49528