Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34838332_34843878_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

34838332 - 34843878

Intron Length:

5547

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCC|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

TTGTTTCCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

TCTTTTTTGATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.9

0.31

1.3

54.4

44.7

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

76.9

0.61

0.8

70.5

36.3

Minor 5ss

28.5

-2.5

3.1

35.7

41.3

Minor BPS

71.1

0.75

1.1

81.5

34.7

Associated Gene:

Gene:

ZRANB3

Ensembl Gene ID:

ENSAPLG00000014815

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015463

34837906 - 34885042

47137