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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34863280_34864939_F


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34863280 - 34864939

Intron Length:
1660

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTATTTGAC

5'SS Class:
major

3'SS Sequence:
TTTTTTTTTACAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTGTCAC

U12 Branch Point Sequence:
TTTTTTTTTACA

Flanking Amino Acid:
GTPALGRPEELFMQIEALFP

Intron Amino Acid Position:
195

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1
70.3
33.7

Major BPS
74.9
0.62
1.1
77.4
37.4

Major PPT
98.8
1.1
0.5
95.2
16.3

Minor 5ss
39.1
-1.2
3.1
52.1
45.1

Minor BPS
71.2
0.66
1.5
82.45
31.9

Associated Gene:

Gene:
ZRANB3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34837906 - 34885042
47137