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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34872744_34873379_F


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34872744 - 34873379

Intron Length:
636

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAT|GTAAGACTT

5'SS Class:
strong_major

3'SS Sequence:
TCTCCTTTCCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTACAT

U12 Branch Point Sequence:
GTTTACATATTT

Flanking Amino Acid:
DIQNEVLFTHFEKERQHDIR

Intron Amino Acid Position:
515

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80.3
0.71
1
77.5
37.2

Major BPS
82.7
0.81
0.9
89.3
26.1

Major PPT
79
0.65
0.7
72.6
32.1

Minor 5ss
40.3
-1.1
3.4
62.1
42.3

Minor BPS
49.6
0.05
2
75.01
41.5

Associated Gene:

Gene:
ZRANB3

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34837906 - 34885042
47137