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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34887541_34890471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34887541 - 34890471

Intron Length:

2931

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGAG

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTATTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TCTGCTTTTATT

Flanking Amino Acid:

IHKLFVNAQRVSAMPPLDEE

Intron Amino Acid Position:

942

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

40.1

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

72.5

0.51

1.1

76.1

36.9

Minor 5ss

29.3

-2.4

3.3

Minor BPS

58.6

0.35

1.7

74.98

42.6

Associated Gene:

Gene:

RAB3GAP1

Ensembl Gene ID:

ENSAPLG00000014149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039386

34887298 - 34908204

20907