Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34890575_34891629_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34890575 - 34891629

Intron Length:

1055

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTGAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGCACTGTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTTCAATAATT

Flanking Amino Acid:

ENEEEKEDLQRFVNCLLEQP

Intron Amino Acid Position:

875

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

1.1

81.4

32.7

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

72.1

0.5

70.6

40.2

Minor 5ss

39.9

-1.1

3.3

57.8

46.8

Minor BPS

67.9

0.64

1.8

90.51

32.7

Associated Gene:

Gene:

RAB3GAP1

Ensembl Gene ID:

ENSAPLG00000014149

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039386

34887298 - 34908204

20907

ENSAPLT00000014826

34887298 - 34908204

20907