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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34909002_34913186_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
34909002 - 34913186

Intron Length:
4185

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTAAGATGG

5'SS Class:
major

3'SS Sequence:
TTTGATTTTCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TTTGTTTTGATT

Flanking Amino Acid:
CCASVTPSPHGLNITVREKR

Intron Amino Acid Position:
184

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
79.8
0.7
1
63.7
43.3

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
73.9
0.54
1.1
71.8
42.8

Minor 5ss
37.8
-1.4
3.1
48.3
47.2

Minor BPS
66.4
0.6
1.3
81.5
34.7

Associated Gene:

Gene:
MAP3K19

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34908452 - 34920544
12093