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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34918479_34918679_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
34918479 - 34918679

Intron Length:
201

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACA|GTAAGTTAA

5'SS Class:
major

3'SS Sequence:
AGTTTCGTTGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAT

U12 Branch Point Sequence:
ATTTTAATAACT

Flanking Amino Acid:
EVLGKGAYGTVYCGLTSQGQ

Intron Amino Acid Position:
1068

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
74.3
32.1

Major BPS
99.5
1.23
0.5
98.2
4.2

Major PPT
72.6
0.51
0.9
66.5
40

Minor 5ss
41.7
-0.9
2.8
54.7
43.6

Minor BPS
61.7
0.45
1.9
84.59
35.1

Associated Gene:

Gene:
MAP3K19

Ensembl Gene ID:

Chromosome:
7

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

34912267 - 34920544
8278

34908452 - 34920544
12093