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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34938904_34939986_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34938904 - 34939986

Intron Length:

1083

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGTCTT

5'SS Class:

strong_major

3'SS Sequence:

CTTAACTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATATTCTTAACT

Flanking Amino Acid:

ILETIMLQTLGFEITIEHPH

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.1

0.92

0.8

83.5

35.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

77.9

0.63

0.9

73.8

36.4

Minor 5ss

46.2

-0.4

2.8

67.2

43.9

Minor BPS

83.9

1.14

91.17

31.4

Associated Gene:

Gene:

CCNT2

Ensembl Gene ID:

ENSAPLG00000013992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036358

34938749 - 34951188

12440