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Intron Name: Anas_platyrhynchos_platyrhynchos_7_34940048_34941136_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34940048 - 34941136

Intron Length:

1089

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTAGGTGGA

5'SS Class:

major

3'SS Sequence:

TTATTTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTTAT

U12 Branch Point Sequence:

GTTTGCTTATTT

Flanking Amino Acid:

QEPLLDTKSDAYLQQAQELV

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

65.3

40.8

Major BPS

76.2

0.65

1.1

65.7

43.2

Major PPT

86.3

0.82

0.9

84.8

35.6

Minor 5ss

33.1

-1.9

3.5

43.6

44.4

Minor BPS

59.8

0.39

80.47

41.8

Associated Gene:

Gene:

CCNT2

Ensembl Gene ID:

ENSAPLG00000013992

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036358

34938749 - 34951188

12440