Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_7_34963597_34964062_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

34963597 - 34964062

Intron Length:

466

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

ATATTTTCAATT

Flanking Amino Acid:

PKLKVCFAHGGGAFPYTVGR

Intron Amino Acid Position:

220

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

94.5

1.05

0.7

92.2

16.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

82.9

0.74

0.8

30.8

Minor 5ss

-2.1

2.8

41.5

45.1

Minor BPS

61.1

0.43

1.4

74.9

36.1

Associated Gene:

Gene:

ACMSD

Ensembl Gene ID:

ENSAPLG00000013859

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046274

34954467 - 34981547

27081

ENSAPLT00000014445

34954467 - 34988517

34051